We would like to thank the two anonymous reviewers for their suggestions. Funding for this research was provided by Agriculture and Agri-Food Canada (AAFC) under project J-002295 (Management and enhancement of AAFC&#39;s biological collections).

1. Modification of two-compartment Petri dishes
NOTE: The materials required for this step are listed in the Table of Materials.
<ol>
	<li>Modify the Petri dish lid.
	<ol>
		<li>Using the rotary tool and appropriate carving bit, drill two holes (~7 mm in diameter) in the top of the lid and a 1 cm opening in the side. One hole will be used to irrigate the root (vermiculite) compartment and the other for the hyphae (SAP) compartment.</li>
	</ol>
	</li>
	<li>Modify the Petri dish bottom.
	<ol>
		<li>Drill a notch in the side of the Petri dish bottom for the plant stem using the electric rotary tool. Make sure the notch is not too deep to prevent the liquid from draining. This notch will align with the 1 cm opening in the lid (step 1.1).</li>
		<li>To replace the plastic barrier of the dual-compartment Petri dish with the nylon mesh filter membrane, use the electric rotary tool to drill a 30 mm rectangular notch down to the bottom of the Petri dish.</li>
		<li>For high-resolution observation, drill circular holes ~25 mm in diameter in the bottom of the Petri dish. Depending on requirements, make a single hole (or multiple holes) on the SAP side or one in each compartment. Ensure that the holes are not drilled directly under the irrigation holes of the lid.</li>
	</ol>
	</li>
	<li>Install nylon mesh filter membrane.
	<ol>
		<li>Use the metal guide and paper clip to wedge the piece of the nylon mesh filter membrane in place and press it firmly onto the plastic barrier. Align the top of the membrane with the top of the plastic barrier. Make sure the membrane protrudes from the bottom of the guide.</li>
		<li>Using the pyrography kit, cut along the edge of the metal guide to melt and seal the membrane to the bottom of the Petri dish and the plastic barrier separating the two compartments.</li>
		<li>With the metal guide and paper clip still in place, carefully remove excess nylon mesh filter membrane with tweezers.</li>
		<li>Verify under the dissecting microscope that the nylon mesh filter membrane is properly sealed to the plastic to prevent root penetration into the hyphal (SAP) compartment.</li>
	</ol>
	</li>
	<li>Install coverslip. 
	NOTE: The coverslip is placed under the Petri dish. This allows the immersion oil to be used and the coverslip to be cleaned.
	<ol>
		<li>Place the silicone sealant along the edge of the circular holes (outside the Petri dish bottom).</li>
		<li>Place the coverslip on the outside of the Petri dish bottom and gently press to ensure perfect adhesion.</li>
		<li>Allow to dry, and remove excess sealant with a razor blade.</li>
	</ol>
	</li>
	<li>Inspect and clean.
	<ol>
		<li>Use an air blast to remove any dust or pieces of plastic that may have adhered to the Petri dish.</li>
		<li>Inspect under a dissecting microscope to identify and correct any defects. 
		NOTE: Wear gloves to avoid fingerprints on the Petri dishes</li>
	</ol>
	</li>
</ol>
2. Preparation of 1 L of nutrient solution mMS-1
<ol>
	<li>Prepare stock solutions.
	<ol>
		<li>Macronutrients: Weigh and dissolve the following in 1 L of distilled water: 
		7.31 g of MgSO4&#183;7 H2O, 0.80 g of KNO3, 0.65 g of KCl, and 0.048 g of KH2PO4,.</li>
		<li>Weigh 2.88 g of Ca(NO3)2&#183;4H2O and dissolve in 1 L of distilled water.</li>
		<li>Weigh 0.80 g of NaFeEDTA and dissolve in 0.5 L of distilled water.</li>
		<li>Weigh 0.375 g of KI and dissolve in 0.5 L of distilled water.</li>
		<li>Micronutrients
		<ol>
			<li>Dissolve 3 g of MnCl2&#183;4H2O in 100 mL of distilled water.</li>
			<li>Dissolve 1.325 g of ZnSO4&#183;7H2O in 100 mL of distilled water.</li>
			<li>Dissolve 0.75 g of H3BO3 in 100 ml of distilled water.</li>
			<li>When dissolved, mix the solutions prepared in steps 2.1.5.1-2.1.5.3.</li>
			<li>Weigh 0.65 g of CuSO4&#183;5H2O and dissolve in 50 mL of distilled water.</li>
			<li>Dissolve 0.12 g of Na2MoO4&#183;2H2O in 100 mL of distilled water.</li>
			<li>Add 5 mL of the solution from step 2.1.5.5 and 1 mL from step 2.1.5.6 to the solution from step 2.1.5.4.</li>
			<li>Adjust the volume of the solution obtained in step 2.1.5.7 to 500 mL with distilled water.</li>
		</ol>
		</li>
	</ol>
	</li>
	<li>Prepare 1 L of mMS-1 media.
	<ol>
		<li>Add 700 mL of distilled water to a 2 L glass bottle.</li>
		<li>While constantly stirring with a magnetic bar, add 100 mL of macronutrients solution (step 2.1.1), 100 mL of calcium nitrate solution (step 2.1.2), 5 mL of ferric EDTA solution (step 2.1.3), 1 mL of KI solution (step 2.1.4), and 1 mL of micronutrients solution (step 2.1.5).</li>
		<li>Adjust the volume of the solution to 1000 mL. 
		NOTE: mMS-1 is adapted from B&#233;card and Fortin (1988)14. Sterilization at 121 &#176;C for 15 min is optional as the SAP-AS is not sterile. pH is not adjusted because the SAP has a strong buffering effect, and Par&#233; et al. (2022)12 showed that the conditions on SAP were relatively neutral (6.7 to 7.4).</li>
	</ol>
	</li>
</ol>
3. Preparation of SAP
NOTE: The materials required for this step are listed in the Table of Materials.
<ol>
	<li>Hydrate SAP: mix 5 g of dry SAP with 500 mL of mMS-1 nutrient solution (step 2.2).</li>
	<li>Allow to hydrate for 12 h (overnight) at room temperature (RT).</li>
	<li>Drain and collect the hydrated SAP grains.
	<ol>
		<li>When hydrated SAP is used to fill the 12-well plate (section 7), do not drain the hydrated SAP and mix the hydrated grain and the leftover of mMS-1 nutrient solution. 
		NOTE: Three granulometries of the dry SAP are available: small, medium, and large. The medium granulometry (1-2 mm) is the most appropriate. The SAP of large granulometry swallows too much when hydrated and the Petri dish lid cannot be closed, while the small granulometry SAP leaves little space between them, which is a limitation for the observations of the fungal structure between the grains.</li>
	</ol>
	</li>
</ol>
4. Preparation of seedlings
NOTE: The materials required for this step are listed in the Table of Materials.
<ol>
	<li>Germinate the seeds of P. lanceolata on blotting paper moistened with mMS-1 nutrient solution in a Petri dish.</li>
	<li>Incubate in the dark at RT.</li>
	<li>Rehydrate as needed until rootlets are at least 2 cm long.</li>
</ol>
5. Assembly and management of SAP-AS
NOTE: The materials required for this step are listed in the Table of Materials.
<ol>
	<li>Assemble SAP-AS (step 1 + step 2 + step 3 + step 4)
	<ol>
		<li>Place the seedling stem in the notch on the side of the Petri dish with the root inward and the cotyledons/leaves and stems outward.&#160;</li>
		<li>Cover the roots with approximately 1.5-2 g of vermiculite.</li>
		<li>Hydrate the root compartment with 8 mL of mMS-1 nutrient solution. This will help stabilize the root and vermiculite.</li>
		<li>Add 5 g of hydrated SAP along the nylon mesh filter membrane on the side of the root compartment.</li>
		<li>Add 15 g of hydrated SAP to the hyphal compartment. The hyphal compartment is the compartment with no notch on the side of the Petri dish bottom.</li>
		<li>Before closing the Petri dish with the lid, make sure that the side notches of the lid and the Petri dish bottom are aligned so as not to damage the stem.</li>
		<li>Seal the Petri dish with a strip of paraffin that joins the base and lid, taking care not to crush the young stem.</li>
		<li>Weigh and record the average weight of the Petri dish to determine when the SAP-AS needs to be rehydrated.</li>
		<li>Stack&#160;the Petri dishes to optimize space. Keep the Petri dish in the dark using an opaque cover with an opening on the side for the seedlings.</li>
	</ol>
	</li>
	<li>Manage SAP-AS.
	<ol>
		<li>Hydrate the Petri dishes with mMS-1 nutrient solution only.</li>
		<li>Use the average weight as a reference. When the Petri dish has lightened by 5-6 g, add mMS-1 nutrient solution to bring it back to the original weight. Ensure that the vermiculite and SAP are kept hydrated but not flooded. Roots must have access to oxygen.</li>
		<li>As the seedling and its fungal partner develop, irrigate them more frequently. It is not necessary to water both compartments at the same time. Irrigation requirements vary according to seedling development, but also according to the environmental conditions in which SAP-AS are incubated.</li>
		<li>Reduce the irrigation requirements by removing old leaves if the plant has more than three healthy leaves. Remove dead leaves. 
		NOTE: The presence of cations such as K+, Mg2+, and Ca2+ in the mMS-1 nutrient solution tends to decrease the expansion of the SAP network13 through time.</li>
	</ol>
	</li>
</ol>
6. Inoculation of the SAP-AS with a single spore
NOTE: The materials required for this step are listed in the Table of Materials.
<ol>
	<li>Inoculate with a single spore.
	<ol>
		<li>Heat the glass pipette with a flame candle or Bunsen burner. Pull as the glass melts to stretch the glass tube until it separates.</li>
		<li>Under a stereomicroscope, break the tip of the glass pipette to reduce the internal diameter (typically 100-300 &#181;m). This will greatly facilitate the manipulation of individual spores.</li>
		<li>Open the Petri dish, locate the spot where the spore is to be placed, and clear a space among the 5 g of hydrated SAP along the nylon mesh filter membrane to expose a section of a root.</li>
		<li>Under the dissecting microscope, pick up a spore with the extruded pipette. Pipette some liquid before pipetting the spore. Avoid pipetting liquid after collecting the spore.</li>
		<li>Under the dissecting microscope, carefully deposit the spore on the root. The liquid pipetted before pipetting the spore will help to expel the spore. If the spore is not deposited in an optimal place, use an acupuncture needle or brush hair to bring the spore back into contact with the root. If necessary, take a photo of the spore deposited on the root for reference and use a marker to locate the inoculation site.</li>
		<li>Replace the SAP over the root fragment to provide a moist microenvironment for the root and spore. Wait at least 24 h before irrigating the root compartment, and be careful not to wash the spore off the root.</li>
		<li>Before closing the Petri dish with the lid, make sure that the side notches of the lid and the bottom of the Petri dish are aligned so as not to damage the stem of the seedling. 
		NOTE: The SAP-AS is ready for inoculation when the roots reach the nylon mesh filter membrane, ideally a few days after irrigation, so there is no free liquid.</li>
	</ol>
	</li>
</ol>
7. Spore germination on SAP (optional)
NOTE: The materials required for this step are listed in the Table of Materials.
<ol>
	<li>Germination of spores.
	<ol>
		<li>Blend the hydrated SAP to obtain a smooth texture (see step 3.3.1). Air bubbles usually disappear within 24 h or by autoclaving (optional) the blended SAP.</li>
		<li>Using a 20 mL syringe without a needle, pipette approximately 2 g (equivalent to 2 mL) of blended SAP into each well of the 12-well plate.</li>
		<li>Select a spore under the dissecting microscope and use the extruded pipette as described in section 6.</li>
		<li>Under the dissecting microscope, place a spore in the center of each well.</li>
		<li>Incubate the 12-well plate in the dark at RT and monitor germination periodically.</li>
		<li>Under the dissecting microscope, select a spore with a growing hypha (at least a few millimeters in length).</li>
		<li>Add 1 mL of mMS-1 nutrient solution to the well and wait a few minutes for the medium to become more fluid.</li>
		<li>If necessary, use the acupuncture needle to gently remove the spore and hyphae from the substrate.</li>
		<li>Collect the spore either with a pipette or by bringing the roots of a seedling to the surface of the medium in order to stick the spore and hyphae to the roots. Then, place the seedling in the Petri dish as described in step 5.1.3. 
		NOTE: Coordinate spore germination and seedling growth. This method has only been tested with R. irregularis spores.</li>
	</ol>
	</li>
</ol>
8. Live monitoring of symbiosis development
NOTE: The materials required for this step are listed in the Table of Materials.
<ol>
	<li>Routinely observe with a dissecting, upright, or inverted microscope.
	<ol>
		<li>Observe the top of each compartment at 20x &#8211; 40x using a dissecting microscope with white illumination and dark field.</li>
		<li>If an inverted microscope is not available, observe the bottom of each compartment with a dissecting or upright microscope by inverting the Petri dish. Before inverting the Petri dish, allow the SAP-AS to dry for 2 days so that the SAP adheres slightly to the bottom of the Petri dish.</li>
		<li>Make detailed observations at 40x through the bottom of the Petri dish and up to 100x (oil immersion) through the coverslip.</li>
	</ol>
	</li>
	<li>Observe spores and hyphal networks. 
	NOTE: The fungal structures developing inside the SAP grains can be stained.
	<ol>
		<li>Prepare an ink and vinegar solution according to Vierheilig et al. (1998)15. Do not heat.</li>
		<li>Extract a SAP grain containing hyphae and spores and place it in the ink at RT. The ink will penetrate the SAP grain and stain the hyphae and spores within a few minutes.</li>
		<li>Remove the SAP grain and place it in mMS-1 nutrient solution or tap water. The ink will come out of the grain within&#160;12 h, but the spores and hyphae will remain stained.</li>
		<li>Press the SAP grain between two microscope slides to flatten it for photography and spore counting.</li>
	</ol>
	</li>
	<li>Observe arbuscules.
	<ol>
		<li>Extract a few roots from the root compartment and stain using the ink and vinegar protocol according to Vierheilig et al. (1998)15. Be careful not to immerse the roots in the KOH solution for more than 2-3 min; otherwise, the roots will become too fragile for the following steps and disintegrate into unusable debris.</li>
		<li>Under a dissecting microscope, select a root fragment approximately 5 mm long that may contain arbuscules and place it on a slide in a drop of water.</li>
		<li>Using acupuncture needles or extremely thin tweezers, tear off the roots in layers a few cells thick.</li>
		<li>Absorb the water and check under the microscope that the segments with arbuscules are still present and of satisfactory quality, and correctly placed on the slide. At this point, the arbuscules must be easily visible within the root cell layers.</li>
		<li>Allow drying for 2-3 min so the root layers adhere to the slide. Add a drop of polyvinyl alcohol-lactic acidglycerol (PVLG) buffer, and add the coverslip. Observe by standard microscopy methods.</li>
	</ol>
	</li>
</ol>

Culturing Arbuscular Mycorrhizal Fungi Using SAP-AS for Enhanced Observation

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A., Jakobsen, I., Wallander, H. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=.">.</a> Foraging and Resource Allocation Strategies of Mycorrhizal Fungi in a Patchy Environment. Mycorrhizal Ecology. Ecological Studies. , (2003).</li><li>Zheng, C., Chai, M., Jiang, S., Zhang, S., Christie, P., Zhang, J. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Foraging+capability+of+extraradical+mycelium+of+arbuscular+mycorrhizal+fungi+to+soil+phosphorus+patches+and+evidence+of+carry-over+effect+on+new+host+plant.">Foraging capability of extraradical mycelium of arbuscular mycorrhizal fungi to soil phosphorus patches and evidence of carry-over effect on new host plant.</a> Plant Soil. 387 (1-2), 201-217 (2015).</li><li>Singh, A. K., et al. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=The+role+of+glomalin+in+mitigation+of+multiple+soil+degradation+problems.">The role of glomalin in mitigation of multiple soil degradation problems.</a> Crit Rev Environ Sci Technol. 52 (9), 1604-1638 (2022).</li><li>Wilson, G. W. T., Rice, C. W., Rillig, M. C., Springer, A., Hartnett, D. C. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Soil+aggregation+and+carbon+sequestration+are+tightly+correlated+with+the+abundance+of+arbuscular+mycorrhizal+fungi:+results+from+long-term+field+experiments.">Soil aggregation and carbon sequestration are tightly correlated with the abundance of arbuscular mycorrhizal fungi: results from long-term field experiments.</a> Ecol Lett. 12 (5), 452-461 (2009).</li><li>Gianinazzi, S., Gollotte, A., Binet, M. -. N., van Tuinen, D., Redecker, D., Wipf, D. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=Agroecology:+the+key+role+of+arbuscular+mycorrhizas+in+ecosystem+services.">Agroecology: the key role of arbuscular mycorrhizas in ecosystem services.</a> Mycorrhiza. 20 (8), 519-530 (2010).</li><li>St&#252;rmer, S. L. <a target="_blank" href="http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=PubMed&cmd=Search&doptcmdl=Citation&defaultField=Title+Word&term=A+history+of+the+taxonomy+and+systematics+of+arbuscular+mycorrhizal+fungi+belonging+to+the+phylum+Glomeromycota.">A history of the taxonomy and systematics of arbuscular mycorrhizal fungi belonging to the phylum Glomeromycota.</a> Mycorrhiza. 22 (4), 247-258 (2012).</li><li>Gerdemann, J. W., Nicolson, T. 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The authors have nothing to disclose.

Inoculation is the most critical step in the protocol, and the extruded glass Pasteur pipettes proved to be an excellent tool for accurately manipulating single spores of AM fungi while preserving their integrity. The extruded glass Pasteur pipettes are easily shaped using the flame of a candle or Bunsen burner, and the opening can be adjusted under the stereomicroscope to match the size of the spore being pipetted. It is important to manipulate the spores with tools adapted to the size of AM fungal spore (Supplementary Figure 1) and to inoculate the SAP-AS when the host plant roots are long enough to reach the Nitex membrane where the spore is deposited.
The SAP-AS are easy to adapt to the experiment requirements. Larger Petri dishes can be used, with multi-compartments, to monitor, for example, the interaction between closely relative strains or between different species of AMF or to modify the chemical (pH) or biological environment (introduction&#160;of nematodes, bacteria, fungi). Various mycotrophic host plants can also be used to provide the AM fungi with photosynthates. The nutrient solution mMS-1 was derived from the minimal (M) medium recipe described by B&#233;card and Fortin (1988)15 minus the sucrose, vitamins, and bacto agar to limit carbon sources. However, the SAP-AS can be supplemented with various nutrient solutions, depending on the experiment objectives.
The propagation of AM fungi in SAP-AS requires regular watering. The limited volume of vermiculite and SAP exposes the roots and the AM fungus to fluctuations in humidity, especially in standard two-compartment Petri dishes (10 cm diameter). The ability to expand and, therefore, the transparency of the SAP grains decreases over time. In fact, the presence of cations from the nutrient solution progressively limits the expansion of the acrylate network and requires the replacement of the SAP after months. In addition, green algae and mold may grow over time if Petri dishes are not properly protected from light or overwatered.
To date, seven AM fungal species have been successfully cultivated in SAP-AS, which is far below the number of AM fungal species that can be propagated in pot cultures. However, both the biotic and abiotic conditions in SAP-AS are very similar to those in pot cultures, and it is likely that other AM fungal species should be able to propagate in SAP-AS. Direct inoculation of spores in SAP-AS probably provides environmental conditions closer to those of the rhizosphere in a natural soil due to the presence of root exudates and/or bacteria, if non-sterile spores/seeds are used for inoculation. This should be preferred to inoculation with germinated spores. In addition, the conditions that trigger spore germination within AMF are still poorly understood, therefore SAP hydrated with mMS-1 nutrient solution may not be adapted to germinate spores of other AM fungal species. Spore germination on SAP hydrated with mMS-1 nutrient solution was tested to specifically select viable spores for the inoculation step using only R. irregularis inoculum.
Inoculation and monitoring of the development of the AM symbiosis are easily performed in SAP-AS. The modified two-compartment Petri dishes allow the cultivation of different AM fungal species. Par&#233; et al.12 have propagated seven different AMF species from six genera and three families. Modification of two-compartment Petri dishes is easily done with inexpensive tools. The cost and quantity of materials (vermiculite, SAP, Pasteur pipette, etc.) and reagents (mMS-1) required to prepare and maintain the SAP-AS are limited, allowing a large number of SAP-AS to be managed at minimal cost. The ability to stack the SAP-AS also significantly reduces the footprint of AM fungal cultures compared to pot cultures. For example, 50 SAP-AS (5 stacks of ten) can fit on a 1 m long shelf (Supplementary&#160;Figure 2). These features make the SAP-AS a simple and inexpensive technique that is compatible with teaching AM symbiosis in high school lab courses or at the undergraduate level in universities. Colonized grains of SAP can be used to inoculate new SAP-AS or pot cultures.
The presence of a coverslip at the back of the bottom of the Petri dish allows high-resolution photography and video of the extraradical fungal structures. The cytoplasmic flow can be easily studied under living conditions that are very close to natural conditions. This is of great importance for studies of AM fungi functions related to their mycelia (nutrients, water transport, soil structure, etc.) and for studies of hyphal morphogenesis.
AMF complete their biological cycle in plant roots and within the rhizosphere. The study of soil microorganisms is complex due to the inherent difficulty of observing the soil environment. The main objective of the SAP-AS is to recreate an environment as similar as possible to the rhizosphere for the propagation of AM fungi while maintaining the ability to observe the development of AM fungi in great detail. Because this implies non-sterile conditions, the amount of available carbon should be limited to avoid the proliferation of saprotrophic microorganisms. The knowledge of the behavior of AM fungi in the rhizosphere is still extremely limited, and the SAP-AS offers the possibility to make detailed comparisons between species regarding their ability to forage in the extraradical environment, their spore production, and their root colonization. This can be further complicated by adding interactions with other soil species such as bacteria, nematodes, protists, and root fungal pathogens, and the knowledge of soil microbiota interactions can be improved thanks to the SAP-AS.

Arbuscular mycorrhizal (AM) fungi (Glomeromycotina) are ancient plant root symbionts (~500 Ma1,2) that may have played an essential role in the colonization of terrestrial soils by tracheophytes. This long coevolution between AM fungi and tracheophytes places arbuscular mycorrhiza as a masterpiece of interkingdom mutualism. AM fungal hyphae significantly increase the ability of the host to forage for soil nutrients3, including nutrient carry-over to new hosts via mycorrhizal networks4. The hyphal network improves soil structure, and the production of glomalin could reduce soil erosion5. The transfer of part of the atmospheric carbon to the fungal root symbiont increases soil carbon sequestration6. Overall, AM fungi improve plant resilience to both abiotic and biotic stresses and have therefore, received considerable attention in agroecology7. Indeed, AM fungi-friendly agricultural management practices have the potential to reduce the use of chemical inputs for crop production and improve soil organic carbon content, which are important objectives that farmers need to integrate into their management practices in order to comply with national and international commitments regarding the transition to sustainable agricultural practices and the fight against climate change.
However, AM fungi are soil microscopic fungi, and their study is difficult due to their obligate biotrophy and rhizosphere distribution. Soil is one of the most difficult biotopes to study because of its opacity, the huge diversity of niches, and multi-trophic interactions at all scales. The isolation, propagation, and characterization of AM fungi are, therefore difficult. Until the middle of the 20th century, only AM fungal species forming sporocarps had been characterized8. However, the majority of AM fungal species produce non-sporocarpic spores ranging from ~20 &#956;m to ~500 &#956;m in diameter. The description of the soil wet sieving technique9 opened the way to describe these AM fungal species, and the rate of species description has increased since then. Nevertheless, AM fungi represent a small group of species compared to Dikarya.
Trap cultures, i.e., the inoculation with spores or an environmental soil sample containing AM fungal spores of a pot filled with autoclaved material such as turface&#160;and vermiculite and a sterilized seed of a host (leek, plantain), is one way to propagate AM fungi under controlled conditions10. However, the success of the inoculation can only be assessed by looking for the presence of arbuscules in root fragments after staining or by wet sieving a subsample or the entire pot to isolate spores. It is usually recommended not to disturb the system for at least 6-12 weeks before the analysis of the pot culture. This culture technique is suitable for propagating most known AM fungal species, but live observation of the fungal symbiont is not possible, and the success of inoculation is uncertain, especially when single spore cultures are attempted.
On the contrary, the in vitro propagation of AM fungi can be monitored live thanks to the transparency of the culture medium11, but this culture technique requires the availability of transformed roots and the presence of carbon in the culture medium to work in a sterile environment. The spores must be sterilized, and together with the association with a heterotrophic host, most of the known AM fungal species are not successfully propagated using this technique.
Therefore, the propagation of AM fungi using current techniques, although established and widely used in most laboratories, has some limitations for the study of AM fungi. Par&#233; et al. (2022)12 developed an in vivo technique using a transparent superabsorbent polymer (SAP) in combination with whole plants to propagate AM fungi. The technique, designed as an SAP-based autotrophic system (SAP-AS), is simple and inexpensive and combines the advantages of pot culture (association with an autotrophic host, non-sterile conditions) and in vitro cultures (transparent medium, live monitoring of symbiosis development). Here, we present a protocol explaining how to set up the cultures with single spore inoculation and use the SAP-AS for high-magnification observation of the extraradical mycelium. Specifically, we describe how to modify two-compartment Petri dishes, prepare the nutrient solution, prepare the superabsorbent polymer (SAP), prepare the seedlings, assemble the SAP-AS and inoculate with a single spore, pregerminate the spores, and live monitor the development of the symbiosis.

<table border="1" fo:keep-together.within-page="1" fo:keep-with-next.within-page="always">
	<tbody>
		<tr>
			<td>100 x 15 mm Stackable Bi-Plate</td>
			<td>Kord Valmark</td>
			<td>1204U09</td>
			<td>https://www.thomassci.com/Laboratory-Supplies/Petri-Dishes/_/100-x-15-mm-Stackable-Bi-Plate</td>
		</tr>
		<tr>
			<td>12-well plate&#160;</td>
			<td>Greiner Bio-one</td>
			<td>665180</td>
			<td>https://shop.gbo.com/en/row/products/bioscience/cell-culture-products/cellstar-cell-culture-multiwell-plates/665180.html</td>
		</tr>
		<tr>
			<td>18 mm round glass coverslips</td>
			<td>Fisher Scientific</td>
			<td>12-545-100</td>
			<td>https://www.fishersci.com/shop/products/fisherbrand-cover-glasses-circles-11/12545100#?keyword=12-545-100</td>
		</tr>
		<tr>
			<td>20 mL Syringe PP/PE without needle</td>
			<td>Millipore Sigma</td>
			<td>Z683620-100EA</td>
			<td>https://www.sigmaaldrich.com/CA/en/product/aldrich/z683620?utm_source=google&#38;utm_medium= 
			cpc&#38;utm_campaign=20674735406 
			&#38;utm_content=157607444391&#38;gc 
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			vgQOT_WPRg9WFyBEyoO4b0x1 
			-F7Tks4houU7VTRS5EiYM9l0F-B 
			oL7saAmFoEALw_wcB</td>
		</tr>
		<tr>
			<td>Acupuncture needle&#160;</td>
			<td>Lierre</td>
			<td>A143-LP1-3075</td>
			<td>https://www.lierre.ca/products/lierre-plus-acupuncture-needles-100pcs?gad 
			_source=1&#38;gclid=Cj0KCQiA5rGuBh 
			CnARIsAN11vgTwupmw51UTdR 
			k9cKr4ewi12W3dyVikenzH3sjdUB4 
			g41G-_KnvppoaAkbTEALw_wcB&#38; 
			utm_campaign=PMax-needles&#38;utm_content=shopify_CA_ 
			5213169090694_35001500991622 
			&#38;utm_medium=cpc&#38;utm_source= 
			google&#38;variant=35001500991622</td>
		</tr>
		<tr>
			<td>Blotting paper</td>
			<td>FLINN&#160;</td>
			<td>FB0678</td>
			<td>https://www.flinnsci.ca/blotting-paper-12-x-19-pkg.-of-10/fb0678/</td>
		</tr>
		<tr>
			<td>Commercial or scientific blender or kitchen hand blender</td>
			<td>kitchenaid</td>
			<td>KHBV53DG</td>
			<td>https://www.kitchenaid.ca/en_ca/countertop-appliances/hand-blenders/hand-blender-products/p.variable-speed-corded-hand-blender.khbv53dg.html&#160;</td>
		</tr>
		<tr>
			<td>Dremel 199 Carving Bit</td>
			<td>Dremel</td>
			<td>2615000199</td>
			<td>https://www.dremel.com/ca/en/p/199-2615000199</td>
		</tr>
		<tr>
			<td>Dry SAP medium granulometry 1&#8211;2 mm</td>
			<td>HORTA-SORB MD</td>
			<td>00810085242789</td>
			<td>https://www.horticulturalalliance.com/product/horta-sorb-md-granule/</td>
		</tr>
		<tr>
			<td>Feather Stainless-Steel Blades for Dissecting Knife Handles&#160;</td>
			<td>Fisher Scientific</td>
			<td>08-916-5B</td>
			<td>https://www.fishersci.ca/shop/products/graham-field-stainless-steel-blades-dissecting-knife-handles-8/089165b</td>
		</tr>
		<tr>
			<td>Glass Pasteur pipettes 230 mm</td>
			<td>Kimble</td>
			<td>RK-25554-14</td>
			<td>https://www.coleparmer.ca/i/dwk-life-sciences-kimble-disposable-pasteur-pipettes-plugged-end-borosilicate-glass-230-mm-1000-cs/2555414</td>
		</tr>
		<tr>
			<td>Ink</td>
			<td>Sheaffer</td>
			<td>94321</td>
			<td>https://www.amazon.com/Sheaffer-Skrip-Bottled-Black-94231/dp/B002IKKKUU</td>
		</tr>
		<tr>
			<td>Melting guide: modified paint Scraper, 2-in</td>
			<td>Mastercraft</td>
			<td>#049-7335-8</td>
			<td>https://www.canadiantire.ca/en/pdp/mastercraft-carbon-steel-flexible-spackling-putty-knife-wall-paint-scraper-2-in-0497335p.0497335.html?loc=plp</td>
		</tr>
		<tr>
			<td>Microscopy glass slide</td>
			<td>Fisher Scientific</td>
			<td>12-552-5</td>
			<td>https://www.fishersci.com/shop/products/fisherbrand-frosted-microscope-slides-4/125525</td>
		</tr>
		<tr>
			<td>Nitex nylon mesh filter screen&#160;</td>
			<td>Dynamic Aqua-Supply Ltd.</td>
			<td>NTX30-108</td>
			<td>https://dynamicaquasupply.com/products/nitex-screen?_pos=1&#38;_sid=ffc105328&#38;_ss=r&#38; 
			variant=6945749106731</td>
		</tr>
		<tr>
			<td>Paper clip</td>
			<td>Makanu</td>
			<td>&#8206;Clips-BK-41mm-24</td>
			<td>https://www.amazon.ca/classeur-standard-grandes-trombones-excellentes</td>
		</tr>
		<tr>
			<td>Parafilm</td>
			<td>Avantor/vwr</td>
			<td>470201-930</td>
			<td>https://www.avantorsciences.com/ca/en/product/8882964/parafilm</td>
		</tr>
		<tr>
			<td>Plantago lanceolata seeds</td>
			<td>ecoumene</td>
			<td>NA</td>
			<td>https://www.ecoumene.com/produit/semences/herbacees/plantain-lanceole-bio/</td>
		</tr>
		<tr>
			<td>Polyvinyl alcohol-lactic acid-glycerol (PVLG).</td>
			<td>NA</td>
			<td>NA</td>
			<td>https://invam.ku.edu/recipes</td>
		</tr>
		<tr>
			<td>Pyrography kit with fine tip</td>
			<td>Walnut Hollow</td>
			<td>483103</td>
			<td>https://www.walnuthollow.com/collections/creative-wood-burning/products/walnut-hollow-creative-versa-tool</td>
		</tr>
		<tr>
			<td>Silicone sealant</td>
			<td>Aqueon</td>
			<td>100165003</td>
			<td>https://www.aqueon.com/products/aquariums/silicone-sealant</td>
		</tr>
		<tr>
			<td>Surgeon scalpel handle</td>
			<td>Fisher Scientific</td>
			<td>22-079657</td>
			<td>https://www.fishersci.ca/shop/products/surgical-design-scalpel-handles-blades/22079657#?keyword=scalpel</td>
		</tr>
		<tr>
			<td>Two Speed Rotary Tool Kit</td>
			<td>Dremel</td>
			<td>200-1/21</td>
			<td>https://www.dremel.com/ca/en/p/200-1-21-f0130200ah</td>
		</tr>
		<tr>
			<td>Vermiculite</td>
			<td>PRO-MIX</td>
			<td>4981110</td>
			<td>https://www.canadiantire.ca/fr/pdp/vermiculite-pro-mix-9-l-0597936p.0597936.html</td>
		</tr>
		<tr>
			<td>X1000 Round Coverslip dia. 30 mm #1 (0.13&#8211;0.16 mm)</td>
			<td>Fisher Scientific</td>
			<td>12164692</td>
			<td>https://www.fishersci.fi/shop/products/x1000-cover-slip-diam-30-mm-n-1-1/12164692</td>
		</tr>
	</tbody>
</table>

inoculating and observing arbuscular mycorrhizal cultures on superabsorbent polymer-based autotrophic systems

Arbuscular mycorrhizal (AM) fungi are difficult to manipulate and observe due to their permanent association with plant roots and propagation in the rhizosphere. Typically, AM fungi are cultured under in vivo conditions in pot culture with an autotrophic host or under in vitro conditions with Ri Transfer-DNA transformed roots (heterotrophic host) in a Petri dish. Additionally, the cultivation of AM fungi in pot culture occurs in an opaque and non-sterile environment. In contrast, in vitro culture involves the propagation of AM fungi in a sterile, transparent environment. The superabsorbent polymer-based autotrophic system (SAP-AS) has recently been developed and shown to combine the advantages of both methods while avoiding their respective limitations (opacity and heterotrophic host, sterility). Here, we present a detailed protocol for easy preparation, single spore inoculation, and observation of AM fungi in SAP-AS. By modifying the Petri dishes, high-resolution photographic and video observations were possible on living specimens, which would have been difficult or impossible with current in vivo and in vitro techniques.

The SAP-AS is a simple and inexpensive technique for culturing AM fungi and observing the development of intraradical and extraradical fungal structures. Here, we provided a detailed protocol to help users set up SAP-AS and we introduced two modifications compared to the original description of the SAP-AS.
First, the presence of SAP on the root compartment along the Nitex membrane facilitates the inoculation of the system with a single spore (Figure 1).
<img alt="Figure 1" class="xfigimg" src="/files/ftp_upload/66848/66484fig01.jpg" /> 
Figure 1: Single spore inoculation of the SAP-AS. (A) Inoculation with a single spore of Rhizophagus irregularis. (B) Inoculation with a single spore of Funneliformis mosseae. The white arrows indicate the point of inoculation. Scale bars: 500 &#181;m. <a href="https://www-jove-com.remotexs.ntu.edu.sg/files/ftp_upload/66848/66484fig01large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
It is easy to identify an area with a few roots where the spore can be deposited. The exact location of the spore can be marked on the surface of the Petri dish lid and checked periodically for germination and colonization of the roots. The presence of hydrated grains of SAP provides a moist environment conducive to spore germination. The inoculation on the roots next to the Nitex membrane allows rapid development of the symbiosis with the extraradical mycelium to quickly access the hyphal compartment and forage for nutrients (Figure 2). The ability to observe whether the single spore placed at the inoculation point germinates or not also allows us to identify and remove unsuccessful cultures and replace them.
Second, the coverslips at the bottom of the Petri dish allow high-resolution live imaging of the AM-fungal symbiosis (Figure 2B,C) and, in particular, of the cytoplasmic flow within the extraradical mycelium (Figure 2D).
<img alt="Figure 2" class="xfigimg" src="/files/ftp_upload/66848/66484fig02.jpg" /> 
Figure 2: Inoculated SAP-AS. (A) SAP-AS inoculated with a single spore of Rhizophagus irregularis (DAOM 197198). The host plant is Plantago lanceolata. (B) Cluster of spores observed through the coverslip in the hyphal compartment under a stereomicroscope. Scale bar: 500 &#181;m. (C) High-resolution photograph of the spore cluster observed through the coverslip under a light microscope at 10x magnification. Scale bar: 100 &#181;m (D) High-resolution photograph of hyphae observed through the coverslip under a light microscope at 100x magnification. Scale bar: 10 &#181;m. <a href="https://www-jove-com.remotexs.ntu.edu.sg/files/ftp_upload/66848/66484fig02large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
Users can attempt to germinate AM fungal spores on SAP hydrated with mMS-1 nutrient solution to guarantee the SAP-AS are inoculated only with viable spores (Figure 3). However, this was tested only with commercial spores of R. irregularis, and the success of spore germination on SAP hydrated with mMS-1 nutrient solution may vary significantly with other AM fungal species.
<img alt="Figure 3" class="xfigimg" src="/files/ftp_upload/66848/66484fig03.jpg" /> 
Figure 3: Germination of R. irregularis spores in 12-well plate. Scale bar: 500 &#181;m. <a href="https://www-jove-com.remotexs.ntu.edu.sg/files/ftp_upload/66848/66484fig03large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
Finally, because SAP-AS is an in vivo, non-sterile technique for propagating AMF, the Petri dish can be manipulated on the bench and opened to sample colonized roots, free spores, or colonized grains of SAP (Figure 4). Intraradical and extraradical fungal structures can be stained in a manner similar to AMF propagated in pot or root organ cultures (Figure 4C).
<img alt="Figure 4" class="xfigimg" src="/files/ftp_upload/66848/66484fig04.jpg" /> 
Figure 4: Extraradical and intraradical AM fungal structures extracted from the SAP-AS. (A) Free spores of R. irregularis observed in the root compartment. Scale bar: 200 &#181;m. (B) Spores of R. irregularis stained in SAP. Scale bar: 500 &#181;m. (C) Stained root fragments showing the intraradical hyphae and arbuscules. Scale bars: 50 &#181;m, 100 &#181;m. <a href="https://www-jove-com.remotexs.ntu.edu.sg/files/ftp_upload/66848/66484fig04large.jpg" target="_blank">Please click here to view a larger version of this figure.</a>
Supplementary Figure 1: Comparison of the thickness of the various tools available to manipulate AM fungal spores. <a href="https://www-jove-com.remotexs.ntu.edu.sg/files/ftp_upload/66848/Supplementary Figure 1.zip" target="_blank">Please click here to download this File.</a>
Supplementary Figure 2: Stacked SAP-AS. <a href="https://www-jove-com.remotexs.ntu.edu.sg/files/ftp_upload/66848/Supplementary Figure 2.zip" target="_blank">Please click here to download this File.</a>

Author Spotlight: Enhancing AM Fungi Research with SAP-AS &#8212; A Novel Technique for Single-Spore Cultures

Here, we describe a simple and inexpensive technique for inoculating and observing arbuscular mycorrhizal fungi in superabsorbent polymer-based autotrophic systems.

Inoculating and Observing Arbuscular Mycorrhizal Cultures on Superabsorbent Polymer-Based Autotrophic Systems

Arbuscular mycorrhizal (AM) fungi are difficult to manipulate and observe due to their permanent association with plant roots and propagation in the ...

inoculating-observing-arbuscular-mycorrhizal-cultures-on

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JoVE Journal

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1.5K Views.  Université Laval. Here, we describe a simple and inexpensive technique for inoculating and observing arbuscular mycorrhizal fungi in superabsorbent polymer-based autotrophic systems.

Video: Author Spotlight: Enhancing AM Fungi Research with SAP-AS — A Novel Technique for Single-Spore Cultures

A Whole Cell Bioreporter Approach to Assess Transport and Bioavailability of Organic Contaminants in Water Unsaturated Systems

Bioavailability of contaminants is a prerequisite for their effective biodegradation in soil. The average bulk concentration of a contaminant, however, is not an appropriate measure for its availability; bioavailability rather depends on the dynamic interplay of potential mass transfer (flux) of a compound to a microbial cell and the capacity of the latter to degrade the compound. In water-unsaturated parts of the soil, mycelia have been shown to overcome bioavailability limitations by actively transporting and mobilizing organic compounds over the range of centimeters. Whereas the extent of mycelia-based transport can be quantified easily by chemical means, verification of the contaminant-bioavailability to bacterial cells requires a biological method. Addressing this constraint, we chose the PAH fluorene (FLU) as a model compound and developed a water unsaturated model microcosm linking a spatially separated FLU point source and the FLU degrading bioreporter bacterium Burkholderia sartisoli RP037-mChe by a mycelial network of Pythium ultimum. Since the bioreporter expresses eGFP in response of the PAH flux to the cell, bacterial FLU exposure and degradation could be monitored directly in the microcosms via confocal laser scanning microscopy (CLSM). CLSM and image analyses revealed a significant increase of the eGFP expression in the presence of P. ultimum compared to controls without mycelia or FLU thus indicating FLU bioavailability to bacteria after mycelia-mediated transport. CLSM results were supported by chemical analyses in identical microcosms. The developed microcosm proved suitable to investigate contaminant bioavailability and to concomitantly visualize the involved bacteria-mycelial interactions.

A whole cell bioreporter assay with Burkholderia sartisoli RP037-mChe was developed to detect fractions of an organic contaminant (i.e., fluorene) available for bacterial degradation after active transport by mycelia bridging air-filled pores in a water unsaturated model system.

Bioavailability of contaminants is a prerequisite for their effective biodegradation in soil. The average bulk concentration of a contaminant, however, is ...

A New Application of the Electrical Penetration Graph (EPG) for Acquiring and Measuring Electrical Signals in Phloem Sieve Elements

Electrophysiological properties of cells are often studied in vitro, after dissociating them from their native environments. However, the study of electrical transmission between distant cells in an organism requires in vivo, artifact-free recordings of cells embedded within their native environment. The transmission of electrical signals from wounded to unwounded areas in a plant has since long piqued the interest of botanists. The phloem, the living part of the plant vasculature that is spread throughout the plant, has been postulated as a major tissue in electrical transmission in plants. The lack of suitable electrophysiological methods poses many challenges for the study of the electrical properties of the phloem cells in vivo. Here we present a novel approach for intracellular electrophysiology of sieve elements (SEs) that uses living aphids, or other phloem-feeding hemipteran insects, integrated in the electrical penetration graph (EPG) circuit. The versatility, robustness, and accuracy of this method made it possible to record and study in detail the wound-induced electrical signals in SEs of central veins of the model plant Arabidopsis thaliana1. Here we show that EPG-electrodes can be easily implemented for intracellular electrophysiological recordings of SEs in marginal veins, as well as to study the capacity of SEs to respond with electrical signals to several external stimuli. The EPG approach applied to intracellular electrophysiology of SEs can be implemented to a wide variety of plant species, in a large number of plant/insect combinations, and for many research aims.

A New Application of the Electrical Penetration Graph EPG for Acquiring and Measuring Electrical Signals in Phloem Sieve Elements

Electrical Penetration Graph (EPG) is a well-established technique for studying the feeding behavior of stylet-bearing insects. Here we show a new application of EPG as a non-invasive tool for the acquisition of intracellular electrophysiology recordings of sieve elements (SEs), the cells that form the phloem vasculature in plants.

Electrophysiological properties of cells are often studied in vitro, after dissociating them from their native environments. However, the study of ...

Extracting Metrics for Three-dimensional Root Systems: Volume and Surface Analysis from In-soil X-ray Computed Tomography Data

Plant roots play a critical role in plant-soil-microbe interactions that occur in the rhizosphere, as well as processes with important implications to climate change and crop management. Quantitative size information on roots in their native environment is invaluable for studying root growth and environmental processes involving plants. X-ray computed tomography (XCT) has been demonstrated to be an effective tool for in situ root scanning and analysis. We aimed to develop a costless and efficient tool that approximates the surface and volume of the root regardless of its shape from three-dimensional (3D) tomography data. The root structure of a Prairie dropseed (Sporobolus heterolepis) specimen was imaged using XCT. The root was reconstructed, and the primary root structure was extracted from the data using a combination of licensed and open-source software. An isosurface polygonal mesh was then created for ease of analysis. We have developed the standalone application imeshJ, generated in MATLAB1, to calculate root volume and surface area from the mesh. The outputs of imeshJ are surface area (in mm2) and the volume (in mm3). The process, utilizing a unique combination of tools from imaging to quantitative root analysis, is described. A combination of XCT and open-source software proved to be a powerful combination to noninvasively image plant root samples, segment root data, and extract quantitative information from the 3D data. This methodology of processing 3D data should be applicable to other material/sample systems where there is connectivity between components of similar X-ray attenuation and difficulties arise with segmentation.

A methodology for obtaining visual and quantitative root structure information from X-ray computed tomography data acquired in-soil is presented.

Plant roots play a critical role in plant-soil-microbe interactions that occur in the rhizosphere, as well as processes with important implications to ...

A Protocol for Collecting and Constructing Soil Core Lysimeters

Leaching of nutrients from land applied fertilizers and manure used in agriculture can lead to accelerated eutrophication of surface water. Because the landscape has complex and varied soil morphology, an accompanying disparity in flow paths for leachate through the soil macropore and matrix structure is present. The rate of flow through these paths is further affected by antecedent soil moisture. Lysimeters are used to quantify flow rate, volume of water and concentration of nutrients leaching downward through soils. While many lysimeter designs exist, accurately determining the volume of water and mass balance of nutrients is best accomplished with bounded lysimeters that leave the natural soil structure intact. 
Here we present a detailed method for the extraction and construction of soil core lysimeters equipped with soil moisture sensors at 5 cm and 25 cm depths. Lysimeters from four different Coastal Plain soils (Bojac, Evesboro, Quindocqua and Sassafras) were collected on the Delmarva Peninsula and moved to an indoor climate controlled facility. Soils were irrigated once weekly with the equivalent of 2 cm of rainfall to draw down soil nitrate-N concentrations. At the end of the draw down period, poultry litter was applied (162 kg TN ha-1) and leaching was resumed for an additional five weeks. Total recovery of applied irrigation water varied from 71% to 85%. Nitrate-N concentration varied over the course of the study from an average of 27.1 mg L-1 before litter application to 40.3 mg L-1 following litter application. While greatest flux of nutrients was measured in soils dominated by coarse sand (Sassafras) the greatest immediate flux occurred from the finest textured soil with pronounced macropore development (Quindocqua).

A detailed method for extraction and assembly of intact soil core lysimeters and their use for study of leachate and associated loss of nutrients from surface applied poultry litter is demonstrated.

Leaching of nutrients from land applied fertilizers and manure used in agriculture can lead to accelerated eutrophication of surface water. Because the ...

Modification and Application of a Leaf Blower-vac for Field Sampling of Arthropods

Rice fields host a large diversity of arthropods, but investigating their population dynamics and interactions is challenging. Here we describe the modification and application of a leaf blower-vac for suction sampling of arthropod populations in rice. When used in combination with an enclosure, application of this sampling device provides absolute estimates of the populations of arthropods as numbers per standardized sampling area. The sampling efficiency depends critically on the sampling duration. In a mature rice crop, a two-minute sampling in an enclosure of 0.13 m2 yields more than 90% of the arthropod population. The device also allows sampling of arthropods dwelling on the water surface or the soil in rice paddies, but it is not suitable for sampling fast flying insects, such as predatory Odonata or larger hymenopterous parasitoids. The modified blower-vac is simple to construct, and cheaper and easier to handle than traditional suction sampling devices, such as D-vac. The low cost makes the modified blower-vac also accessible to researchers in developing countries.

Assessment of arthropod abundance in crops is critical for investigating population dynamics and species interactions. Here we describe the modification and application of a leaf blower-vac for suction sampling of arthropods in rice.

Rice fields host a large diversity of arthropods, but investigating their population dynamics and interactions is challenging. Here we describe the ...

Implementation of Portable Emissions Measurement Systems (PEMS) for the Real-driving Emissions (RDE) Regulation in Europe

Vehicles are tested in controlled and relatively narrow laboratory conditions to determine their official emission values and reference fuel consumption. However, on the road, ambient and driving conditions can vary over a wide range, sometimes causing emissions to be higher than those measured in the laboratory. For this reason, the European Commission has developed a complementary Real-Driving Emissions (RDE) test procedure using the Portable Emissions Measurement Systems (PEMS) to verify gaseous pollutant and particle number emissions during a wide range of normal operating conditions on the road. This paper presents the newly-adopted RDE test procedure, differentiating six steps: 1) vehicle selection, 2) vehicle preparation, 3) trip design, 4) trip execution, 5) trip verification, and 6) calculation of emissions. Of these steps, vehicle preparation and trip execution are described in greater detail. Examples of trip verification and the calculations of emissions are given.

Implementation of Portable Emissions Measurement Systems PEMS for the Real-driving Emissions RDE Regulation in Europe

The European Commission has developed a Real-Driving Emissions (RDE) test procedure to verify pollutant emissions during real-world vehicle operation using the Portable Emissions Measurement Systems (PEMS). This paper presents the experimental procedures required by the newly-adopted RDE test.

Vehicles are tested in controlled and relatively narrow laboratory conditions to determine their official emission values and reference fuel consumption. ...

Protocols for Quantifying Transferable Pesticide Residues in Turfgrass Systems

Plant canopies in established turfgrass systems can intercept an appreciable amount of sprayed pesticides, which can be transferred through various routes onto humans. For this reason, transferable pesticide residue experiments are required for registration and re-registration by the United States Environmental Protection Agency (USEPA). Although such experiments are required, limited specificity is required pertaining to experimental approach. Experimental approaches used to assess pesticide transfer to humans including hand wiping with cotton gloves, modified California roller (moving a roller of known mass over cotton cloth) and soccer ball roll (ball wrapped with sorbent strip) over three treated turfgrass species (creeping bentgrass, hybrid bermudagrass and tall fescue maintained at 0.4, 5 and 9 cm, respectively) are presented. The modified California roller is the most extensively utilized approach to date, and is best suited for use at low mowing heights due to its reproducibility and large sampling area. The soccer ball roll is a less aggressive transfer approach; however, it mimics a very common occurrence in the most popular international sport, and has many implications for nondietary pesticide exposure from hand-to-mouth contact. Additionally, this approach may be adjusted for other athletic activities with limited modification. Hand wiping is the best approach to transfer pesticides at higher mowing heights, as roller-based approaches can lay blades over; however, it is more subjective due to more variable sampling pressure. Utility of these methods across turfgrass species is presented, and additional considerations to conduct transferable pesticide residue research in turfgrass systems are discussed.

Transferable pesticide residue experiments in turfgrass systems are integral components of human risk exposure assessments. Experimental approaches to measure transferable residues should be adjusted to the human interaction of interest and turfgrass system dynamics. Three transferable pesticide residue protocols are presented and the suitability across three turfgrass systems is discussed.

Plant canopies in established turfgrass systems can intercept an appreciable amount of sprayed pesticides, which can be transferred through various routes ...

Vegetated Treatment Systems for Removing Contaminants Associated with Surface Water Toxicity in Agriculture and Urban Runoff

Urban stormwater and agriculture irrigation runoff contain a complex mixture of contaminants that are often toxic to adjacent receiving waters. Runoff may be treated with simple systems designed to promote sorption of contaminants to vegetation and soils and promote infiltration. Two example systems are described: a bioswale treatment system for urban stormwater treatment, and a vegetated drainage ditch for treating agriculture irrigation runoff. Both have similar attributes that reduce contaminant loading in runoff: vegetation that results in sorption of the contaminants to the soil and plant surfaces, and water infiltration. These systems may also include the integration of granulated activated carbon as a polishing step to remove residual contaminants. Implementation of these systems in agriculture and urban watersheds requires system monitoring to verify treatment efficacy. This includes chemical monitoring for specific contaminants responsible for toxicity. The current paper emphasizes monitoring of current use pesticides since these are responsible for surface water toxicity to aquatic invertebrates.

This article summarizes the design attributes and the effectiveness of treatment systems that treat urban stormwater and agriculture irrigation runoff to remove pesticides and other contaminants associated with aquatic toxicity.

Urban stormwater and agriculture irrigation runoff contain a complex mixture of contaminants that are often toxic to adjacent receiving waters. Runoff may ...

Preparation of DMMTAV and DMDTAV Using DMAV for Environmental Applications: Synthesis, Purification, and Confirmation

Dimethylated thioarsenicals such as dimethylmonothioarsinic acid (DMMTAV) and dimethyldithioarsinic acid (DMDTAV), which are produced by the metabolic pathway of dimethylarsinic acid (DMAV) thiolation, have been recently found in the environment as well as human organs. DMMTAV and DMDTAV can be quantified to determine the ecological effects of dimethylated thioarsenicals and their stability in environmental media. The synthesis method for these compounds is unstandardized, making replicating previous studies challenging. Furthermore, there is a lack of information about storage techniques, including storage of compounds without species transformation. Moreover, because only limited information about synthesis methods is available, there may be experimental difficulties in synthesizing standard chemicals and performing quantitative analysis. The protocol presented herein provides a practically modified synthesis method for the dimethylated thioarsenicals, DMMTAV and DMDTAV, and will help in the quantification of species separation analysis using high performance liquid chromatography in conjunction with inductively coupled plasma mass spectrometry (HPLC-ICP-MS). The experimental steps of this procedure were modified by focusing on the preparation of chemical reagents, filtration methods, and storage.

Preparation of DMMTAV and DMDTAV Using DMAV for Environmental Applications: Synthesis, Purification, and Confirmation

This article presents modified experimental protocols for dimethylmonothioarsinic acid (DMMTAV) and dimethyldithioarsinic acid (DMDTAV) synthesis, inducing dimethylarsinic acid (DMAV) thiolation through mixing of DMAV, Na2S, and H2SO4. The modified protocol provides an experimental guideline, thereby overcoming limitations of the synthesis steps that could have caused experimental failures in quantitative analysis.

Dimethylated thioarsenicals such as dimethylmonothioarsinic acid (DMMTAV) and dimethyldithioarsinic acid (DMDTAV), which are produced by the metabolic ...

Implantation of a New Micro Acoustic Tag in Juvenile Pacific Lamprey and American Eel

Juvenile Pacific Lamprey and American eels were used for laboratory evaluations to determine potential effects from tag implantation. Telemetry technology has been identified as a way to obtain more detailed information on movement and behavior across a broader spatial scale than is possible with other known technology. The purpose of this method is to provide a detailed step by step instruction on tag implantation for both lampreys and eel. For laboratory studies using actively migrating juvenile Pacific Lamprey (120-160 mm), we determined that the presence of the tag did not alter the swimming ability between tagged and untagged Individuals or have any significant tag loss (&lt;3%). Similar results were determined during laboratory testing of Yellow phase American Eels (113-175 mm). No mortality occurred during a 38-day holding period and there was minimal tag loss (3.8%). The presence of the tag did not have any significant effect on the swimming ability or survival of tagged eels compared to untagged controls and there was minimal tag loss.

This article illustrates the procedure for implanting a micro acoustic tag in juvenile Pacific Lamprey and American Eel. Our application is based on laboratory trials, which indicate that acoustic tags can be successfully implanted with no apparent effects on swimming ability or survival and minimal tag loss.

Juvenile Pacific Lamprey and American eels were used for laboratory evaluations to determine potential effects from tag implantation. Telemetry technology ...