Funding for this work was provided by: AG007218 and NIH F32 AG031606.
Images were generated in the Core Optical Imaging Facility, which is supported by UTHSCSA, NIH-NCI P30 CA54174 (CTRC at UTHSCSA) and NIH-NIA P01AG19316.

Note: All animal procedures were approved by the Institutional Animal Care and Use Committee of the University of Texas Health Science Center San Antonio and were consistent with the ARRIVE guidelines.
1.&#160;Anesthetizing for Cortical Preparation
<ol>
	<li>Place the mouse in an induction chamber with 2-3% isofluorane mixed with oxygen to induce anesthesia. Observe the respiration rate decrease as the mouse is induced. Pinch the paw of the mouse to determine whether the mouse is ready to move to the nose cone. Note: Anesthesia level is a critical step in any in vivo preparation and care should be taken not to induce a level that will cause global ischemia.</li>
	<li>Once the mouse is sufficiently anesthetized, transfer the animal to the surgery/imaging platform and place the mouse&#8217;s nose in the nose cone and apply 1-1.2% isofluorane to maintain an anesthetized state. Ensure that the mouse is lying on a temperature controlled heating pad to maintain the body temperature (37&#176;C +/- 0.5&#176;C) throughout the remaining procedures. Place vet ointment over the eyes to prevent dryness while under anesthesia.</li>
	<li>Monitor the physiology of the mouse using a pulse oximetry system using the tail or foot clip provided with the system. Check that the respiratory rate is maintained between 50-65 breaths/min. Check that the heart rate remains between 300 to 450 bpm and oxygen saturation is maintained between 97-98% to ensure long-term survival of the animal.</li>
	<li>When the mouse is adequately anesthetized, shave the hair over the cranium using electric clippers, remove residual hair and clean with betadine, followed by an ethanol swab. Repeat this procedure up to three times to ensure a sterile surgical environment.</li>
</ol>
2. Surgical Procedure
<ol>
	<li>With the scalp fully cleaned and shaven, make a 5 mm incision in the scalp of the mouse to reveal the cranial fissures and to locate bregma.</li>
	<li>Use a sterile cotton applicator to remove any remaining fascia overlying the cranium.</li>
	<li>Glue a custom made stainless steel ring (Figure 1) with tissue adhesive to the bone overlying the parietal cortex using the stereotaxic coordinates of Bregma: -1 to -3 mm and lateral: 2-4 mm. Note: The glue typically sets within 2 min&#160;after the placement of the ring onto the bone.</li>
	<li>Affix the ring to a stereotaxic holder (Figure 2) to stabilize the mouse and to prevent movement during imaging.</li>
	<li>Under a surgical grade dissecting microscope, slowly drill a 1-2 mm section in the cranium using a speed controlled dremel-like tool (Meisinger 3.9 mm drill bit) making sure to keep the area level as it is drilled. Achieve this using a zig-zag pattern. To avoid heat build up, set the drill speed to low and take frequent breaks.</li>
	<li>When the cranial skull becomes shinny in appearance, continue the thinning of the skull using a scalpel blade utilizing the same zig-zag pattern to keep the thinned surface level to facilitate smooth removal of thin layers of cranial skull. Using the tip of the scalpel blade make small linear strokes with light pressure to remove thin layers of bone at a time. Continue this until the vasculature is clearly visible through the dissecting microscope.</li>
	<li>If the experimenter punctures through or break the skull during the thinning process, euthanize the animal due to likely damage to the underlying cortex. 
	Note: The mouse skull is approximately 300 &#181;m in thickness and is comprised of two thin layers of compact bone (one external and one internal layer) and a layer of spongy bone sandwiched between the two layers of compact bone. The external layer of compact bone and most of the spongy bone are removed within the 5 mm drilling area resulting in an approximate 50 &#181;m layer of compact bone remaining (see Figure 2B). Visualization of the vasculature will ensure that the final intact thinned skull is approximately 50 &#181;m in thickness. The skull is therefore still present when thinned to this thickness.</li>
</ol>
3. Microscope Set-up
<ol>
	<li>Use an inverted microscope system (conventional, confocal or two-photon systems) that has an objective inverter. Note: It is also possible to utilize a standard upright microscope. The limiting factor will be the space between the stage and the objectives. Modifications to the stage may be necessary to accomplish this setup.</li>
	<li>Secure the surgical/imaging platform to a custom made stage that is located aside the base of the microscope. Note: The platform is made using a laboratory jack to allow vertical movement of the surgical/imaging platform under the objective. The laboratory jack is mounted to a plate affixed to four cylindrical poles. (See Figure 2).</li>
	<li>Position the objective inverter containing a 20X objective over the cranial window. Use an external light source to find the cranial window by looking through the eyepieces of the microscope and position the objective in the imaging area. Note: The imaging area will be denoted by the presence of the vasculature.</li>
	<li>For water-based objectives, use artificial cerebral spinal fluid (aCSF) (130 mM NaCl; 30 mM KCl; 12 mM KH2PO4; 200 mM NaHCO3; 30 mM HEPES; and 100 mM glucose) as the medium due to potential leakage into the cranial cavity during imaging (Figure 3).</li>
</ol>
4. Rose Bengal Dye Preparation, Administration and Induction of Stroke
<ol>
	<li>Prepare a fresh 20 mg/ml solution of Rose Bengal in artificial cerebral spinal fluid (aCSF); filter and sterilize before administration. Do not reuse or store the Rose Bengal once it has been mixed. Make a fresh solution for each experiment.</li>
	<li>Give a 0.1 ml tail vein injection of Rose Bengal while scanning the cranial window with a 561 nm laser to ensure adequate injection of the solution. Note: Rose Bengal will be visualized within 5 sec after injection in the vasculature of the brain. The entire vessel should be filled with Rose Bengal.</li>
	<li>Following adequate injection of Rose Bengal dye choose an appropriate vessel for thrombosis based on vessel diameter (40-80 &#181;m) to ensure reproducibility of a particular lesion volume. Differentiate between arteries and veins by looking at the direction of blood flow: arteries will move from larger diameter to smaller diameter vessels, veins move from smaller to larger diameter vessels. This is easily accomplished by visualization once Rose Bengal is injected.</li>
	<li>Change the microscope setting as follows:
	<ol>
		<li>Increase the dwell time. Note: This will vary depending on the microscope system being utilized.</li>
		<li>Increase the laser power to 100%.</li>
		<li>Collect time sequence images at 1 frame/sec&#160;using the maximum scan speed.</li>
	</ol>
	</li>
	<li>Scan the mouse until a stable clot is formed within the vessel. Note: This typically is achieved within 5 min&#160;of continuous scanning (See Figure 4).</li>
	<li>Following the induction of clot formation using Rose Bengal, remove the mouse from the imaging area back to the dissecting microscope. Carefully remove the stainless steel ring from the cranial skull. Examine the cranial window for any bleeding. If bleeding occurs, terminate the experiment.</li>
	<li>Use 6.0 monofilament suture to close the incision over the skull. Place antibiotic ointment along the suture line to prevent infection. Inject Buprenex (0.05 mg/kg) subcutaneously every 12 hr for three days for pain management.</li>
	<li>Return the mouse to a recovery chamber following removal from the anesthetic until fully awake and freely moving.</li>
	<li>Return the mouse to a clean cage for further investigation at a later time.</li>
</ol>
5. Longitudinal Imaging on Subsequent Days
<ol>
	<li>Employ the following methods to perform longitudinal imaging on subsequent days post-photothrombosis.
	<ol>
		<li>Anesthetize the mouse as described in Section 1 of the methods.</li>
		<li>Upon adequate anesthesia re-open the scalp by removing any residual sutures to reopen the skin overlying the previously drilled imaging field.</li>
		<li>Use a sterile cotton applicator to remove any remaining fascia overlying the cranium.</li>
		<li>Glue a custom made stainless steel ring (Figure 1) with tissue adhesive to the bone overlying the previous imaging field.</li>
		<li>Affix the ring to a stereotaxic holder (Figure 2) to stabilize the mouse and to prevent movement during imaging.</li>
		<li>Locate the vasculature underlying the previously thinned skull. Use tail vein injection of FITC-Dextran to verify the presence of the previously induced clot.</li>
		<li>Use 6.0 monofilament suture to close the incision over the skull. Place antibiotic ointment along the suture line to prevent infection. Inject Buprenex (0.05mg/kg) subcutaneously every 12 hr for three days for pain management.</li>
		<li>Return the mouse to a recovery chamber following removal from the anesthetic until fully awake and freely moving.</li>
	</ol>
	</li>
</ol>
6. Verification of Stroke Induction (Post-mortem)
<ol>
	<li>At the conclusion of a study, verify stroke volume using 2,3,5-triphenyltetrazolium chloride (TTC) staining as shown in Figure 5. The full method can be found in12.</li>
</ol>

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The authors declare that they have no competing financial interests.

The ability to translate experimental stroke pathophysiology from animal to human application has been plagued with failure. However, the use of animal models, such as the photothrombosis model, allows for improved understanding of stroke pathophysiology and the exploration of new therapeutic approaches to provide neuroprotection following a stroke. Small cortical strokes and microinfarctions produced by the photothrombotic model are clinically relevant to subclinical or &#8220;silent&#8221; stroke13-15, which has a high prevalence and affects approximately 4 percent of the United States population (about 11 million people ) each year16. Silent stroke does not have the classic stroke symptoms present in a larger stroke, such as paralysis, sensory loss and difficulty speaking such as seen in the middle cerebral artery (MCA) occlusion or transient ischemic attack (TIA)17. Also, silent stroke is different from lacunar stroke, which is caused by occlusion of a single penetrating artery in deeper brain structures or within the brain stem and also clinically manifests with motor, sensory or mixed deficits18. Patients with subclinical or &#8220;silent&#8221; stroke typically do not display any outward symptoms and are often unaware they have even suffered a stroke. Silent stroke results in a subclinical decrease in cognitive function exhibited by deficits in memory, decision-making, and changes in behavior. Over time, multiple silent strokes lead to clinically significant signs of memory loss known as vascular or multi-infarct dementia. However, silent stroke brain damage can be detected using neuroimaging, and places a patient at risk for TIA and major stroke in the future19.
The photothrombosis model allows for the production of a reproducible in vivo model of thrombosis in an intact, anesthetized mouse using the photosensitive dye Rose Bengal (RB) in combination with confocal microscopy. There are many advantages of the in vivo photothrombosis model. One advantage of this method is the ability to predefine the location of the stroke using stereotaxic coordinates; allowing one to study particular cell populations across animals. Additionally, the reproducibility of lesion size and volume is well controlled utilizing this method by varying the intensity of the laser light and controlling for vessel size being irradiated20. This method also allows for detailed study of changes in peri-infarct neurotransmission and corresponding contralateral cortex4. Though a single silent stroke causes minimal deficits, the reproducibility of this model allows for the ability to induce multiple silent strokes in specific areas, which can be used to mimic various brain dysfunctions such as vascular dementia. Development of a threshold between multiple silent strokes and clinically evident deficits could be determined in specific areas of the brain through the use of this method as well. Finally, the model allows for longitudinal studies in the same animal allowing for both acute and chronic effects to be observed.
There are, however, some disadvantages in using the photothrombosis model. One disadvantage includes the production of a lesion that is noted as having a small ischemic penumbra when compared to other models of focal stroke4. Secondly, vasogenic and cytotoxic edema formation is possible due to the damage that may occur during the induction of photothrombosis, which more closely resembles traumatic brain injuries than focal stroke4.
When using the photothrombosis model there are a number of factors that must be monitored throughout the experiment. It is critical that the physiological state of the animal be monitored throughout all imaging procedures. It is well known that anesthesia level can affect the physiological status of the animal, with over anesthetizing causing decreased heart rate and oxygen delivery to the animal. This is an important consideration, as this would decrease the availability of oxygen to the brain resulting in global ischemia. Therefore, the use of a system to monitor the physiological status of the animal will allow for the simultaneous non-invasive recording of:Arterial Oxygen Saturation (SpO2); Heart Rate; Breath Rate; Pulse Distention (indicator of local blood flow and signal quality); Breath Distention (surrogate for intraplueral pressure); and core temperature in mice and rats. It is becoming increasingly important to control for anesthesia confounds when working with any animal model to reduce unexpected confounds in translating experimental results to benefits in clinical stoke. The choice, duration and depth of anesthesia can have a drastic impact in animal model of experimental stroke. Studies have demonstrated that anesthetic agents may reduce infarct size and may even provide some protection from cerebral ischemia21-23,24. Additionally, alterations in the production of reactive oxygen species has also been demonstrated in a study comparing the use of halothane and propofol25. This confound is important as one of the primary hypotheses in neuronal death associated with stroke is the production of reactive oxygen species.
One complication of utilizing in vivo microscopy to study the response of the brain to a stroke is the limitation of the imaging depth achievable. In our laboratory using confocal microscopy the imaging depth that can be achieved is in the range of 100-200 &#181;m, while using a two-photon microscope can increase this depth to between 400-500 &#181;m. These confounds are being alleviated by the development of objectives with increased working distances and of decreasing size. For example, the gradient refractive index (GRIN) microlenses are microendoscopes with diameters between 35-1,000 &#181;m and are the smallest available to date. This type of probe cannot be inserted into the tissue without causing invasive damage and have low numerical apertures. Due to the low NA the resolution is inferior compared to traditional optical microscopy objectives26.
In summary, the Rose Bengal photothrombosis model induces an infarct of small size and is useful in studying the cellular response to an infarct in both the acute and chronic phases in a well defined cellular population. This model demonstrates essential cellular characteristics seen with focal ischemia following MCAO and therefore is useful in assessing neuroprotective/neuroregenerative therapies.

The technique described permits visualization of in vivo cellular responses immediately following induction of Rose Bengal photothrombosis in an intact mouse. Rose Bengal (4,5,6,7-tetrachloro-2&#39;,4&#39;,5&#39;,7&#39;-tetraiodofluorescein) is a photosensitive dye used to induce ischemic stroke in animal models (mouse and rat). Following a bolus injection of RB through the tail vein and subsequent illumination through a thinned skull with a 564 nm laser light, a thrombus is induced causing a physiologic stroke1. The method was originally described by Rosenblum and El-Sabban in 1977, and was later adapted by Watson in the mid 1980s1,2. In brief, Rose Bengal is irradiated with green excitation light (561 nm laser in our case), which generates the production of reactive oxygen species, which subsequently activates tissue factor, an initiator of the coagulation cascade. The induction of the coagulation cascade produces an ischemic lesion that is pathologically relevant to clinical stroke3.
Stroke has a complex pathophysiology due to the interplay of many different cells types including neurons, glia, endothelium and the immune system. Choosing the best technique to study a particular cellular process requires multiple considerations. Experimental techniques fall broadly into one of three categories: in vitro, in vivo and in silico with each having advantages and disadvantages. In vitro studies have the primary disadvantage of removing cells from their natural environment and therefore may not reproduce effects seen in an intact, living animal. In vivo techniques provide for enhanced experimental replication of disease states with increased translational significance. In silico generally refers to computer modeling of a disease or cellular process, and while increasingly utilized to study potential drug interactions for example, any information gleaned must still be tested in living cells or tissue.
The ideal model of stroke in the laboratory setting should demonstrate similar pathological features to those seen in the human population. While there are common physiologic characteristics of stroke in the human population, there are also many differences depending on the type of injury experienced. Stroke in the human population occurs as small or large vessel occlusions, hemorrhagic lesions, and artery-to artery or cardio-embolisms that result in varied infarct volumes as well as differences in mechanisms related to each pathology. The advantage of utilizing animal stroke models is the generation of reproducible infarcts that mimic characteristics of human stroke. The most common animal stroke models include artery occlusion using: middle cerebral artery occlusion (embolic or endovascular filament methods) which models distal MCAO and the photothrombosis model. The advantages and disadvantages of each model have been reviewed elsewhere (see 4 and 5). Global ischemic models (MCAO), while relatively easy to perform are less relevant to human stroke than are focal stroke models. In addition, these methods are highly variable in inducing reproducible brain infarct lesions. The photothrombosis model is highly reproducible as long as the experimenter controls their experiments well, providing a clear advantage over MCAO models. However, due to microvasculature insult the model has been described to display a minimal ischemic penumbra, the area where cells are thought to be salvageable 6,7. Additionally, vasogenic edema and cytotoxic edema formation may also be induced following irradiation of the imaging area. Despite these limitations the technique has provided new insight into many physiological processes following stroke8,9,10,11.

<table><tbody><tr><td colspan="4">Reagents</td></tr><tr><td>Rose Bengal</td><td>Sigma</td><td>330000</td><td></td></tr><tr><td>Isoflurane Anesthetic</td><td>MWI Veterinary Supply</td><td>088-076</td><td></td></tr><tr><td>Vetbond</td><td>1469SB</td><td>1469SB</td><td></td></tr><tr><td>aCSF&amp;nbsp;</td><td>126 mM NaCl, 2.5 mM KCl, 1.25 mM NaH&lt;sub&gt;2&lt;/sub&gt;PO&lt;sub&gt;4&lt;/sub&gt;, 2 mM MgCl&lt;sub&gt;2&lt;/sub&gt;, 2 mM CaCl&lt;sub&gt;2&lt;/sub&gt;, 10 mM glucose and 26 mM NaHCO&lt;sub&gt;3&lt;/sub&gt; (pH 7.4).</td><td></td><td></td></tr><tr><td colspan="4">[header]</td></tr><tr><td colspan="4">Equipment</td></tr><tr><td>Dissecting Scissors</td><td>Bioindustrial Products</td><td>500-410</td><td></td></tr><tr><td>Operating scissors 14 cm</td><td>Bioindustrial Products</td><td>12-055</td><td></td></tr><tr><td>Forceps Dumont High Tech #5 style, straight</td><td>Bioindustrial Products</td><td>TWZ-301.22</td><td></td></tr><tr><td>LabJack 132X80</td><td>Optosigma Co</td><td>123-6670</td><td></td></tr><tr><td>Platform for Labjack 8X 8</td><td>Optosigma Co</td><td>145-1110</td><td></td></tr><tr><td>Ear bar holder from stereotaxic setup</td><td>Stoelting/Cyborg</td><td>51654</td><td></td></tr><tr><td>Dispomed Labvent Rodent anesthesia machine</td><td>DRE, Inc.</td><td>15001</td><td></td></tr><tr><td>Tech IV Isoflurane vaporizer</td><td>DRE, Inc.</td><td>34001</td><td></td></tr><tr><td>F Air Canister</td><td>DRE, Inc</td><td>80120</td><td></td></tr><tr><td>Bain circuit breathing tube</td><td>DRE, Inc</td><td>86111B</td><td></td></tr><tr><td>Rodent adapter for bain tube</td><td>DRE, Inc</td><td>891000</td><td></td></tr><tr><td>O&lt;sub&gt;2&lt;/sub&gt; regulator for oxygen tanks</td><td>DRE, Inc</td><td>CE001E</td><td></td></tr><tr><td>Rodent induction chamber</td><td>DRE, Inc</td><td>15004C</td><td></td></tr><tr><td>Ethicon Silk 6-0; 18 in with P-3 needle</td><td>Suture Express</td><td>1639G</td><td></td></tr><tr><td>Objective inverter Optical Adapter</td><td>LSM technologies</td><td></td><td></td></tr><tr><td>Foredom drill Dual voltage 110/120</td><td>Foredom</td><td>134.53</td><td></td></tr><tr><td>Meisinger 3.9 mm drill bit</td><td>Meisinger</td><td></td><td>(Ref#310 104 001 001 009)</td></tr></tbody></table>

rose bengal photothrombosis by confocal optical imaging in vivo: a model of single vessel stroke

In vivo imaging techniques have increased in utilization due to recent advances in imaging dyes and optical technologies, allowing for the ability to image cellular events in an intact animal. Additionally, the ability to induce physiological disease states such as stroke in vivo increases its utility. The technique described herein allows for physiological assessment of cellular responses within the CNS following a stroke and can be adapted for other pathological conditions being studied. The technique presented uses laser excitation of the photosensitive dye Rose Bengal in vivo to induce a focal ischemic event in a single blood vessel. 
The video protocol demonstrates the preparation of a thin-skulled cranial window over the somatosensory cortex in a mouse for the induction of a Rose Bengal photothrombotic event keeping injury to the underlying dura matter and brain at a minimum. Surgical preparation is initially performed under a dissecting microscope with a custom-made surgical/imaging platform, which is then transferred to a confocal microscope equipped with an inverted objective adaptor. Representative images acquired utilizing this protocol are presented as well as time-lapse sequences of stroke induction. This technique is powerful in that the same area can be imaged repeatedly on subsequent days facilitating longitudinal in vivo studies of pathological processes following stroke.

The aim of this method was to induce an ischemic stroke in animal models (mouse and rat) following a bolus injection of RB through the tail vein and subsequent illumination of a thinned skull with a 561 nm laser light. The images in Figure 4 demonstrate the progression of clot formation within a single vessel following irradiation of the area at 0, 1, 1.5 and 2 min. Prior to clot formation the entire vessel is white due to free flowing Rose Bengal. Following the induction of irradiation of the vessel there is an obvious darkening in portions of the vessel and indicates the induction of clot formation (frames 1 and 1.5 min). Following complete occlusion there is a marked accumulation of Rose Bengal dye (white area) preceding the clot (black area) within the vessel. The 2 minute frame demonstrates the complete occlusion of the artery.
To verify the presence of an ischemic stroke TTC staining can be utilized. TTC is a commonly used stain for the detection of cerebral infarction by the formation of red formazan TTC products in healthy tissue. The lack of formazan production (white tissue) indicates the infarct area. The areas indicated by the boxes in Figure 5 demonstrate the typical lesion sizes obtained 1 and 5 days from two separate animals following a clot produced within a vessel approximately 80mm in diameter. Image analysis is performed on a flat bed scanner and the use of ImageJ software. Regions of interest can be drawn within ImageJ to measure the area of the stroke volume for each brain.
<img alt="Figure 1" src="/files/ftp_upload/52794/52794fig1.jpg" /> 
Figure 1: Stainless Steel Ring.&#160;Three views (top, side and bottom views) are shown of the stainless steel ring holder that is applied to the skull of the mouse to affix it to the stereotaxic holder.
<img alt="Figure 2" src="/files/ftp_upload/52794/52794fig2.jpg" /> 
Figure 2: Microscope imaging platform setup for RB photothrombosis.&#160;The surgical/imaging platform contains a holder for the anesthesia tube with nosecone and a stereotaxic holder for the stainless steel ring that is affixed to the skull of the animal to decrease movement of the animal during imaging. The platform is placed on top of and secured to the laboratory jack to allow vertical movement for positioning the mouse under the microscope objective. The laboratory jack is then attached to a microscope stage, which allows for horizontal movement. The microscope stage is placed on top of and secured to four cylindrical poles.
<img alt="Figure 3" src="/files/ftp_upload/52794/52794fig3.jpg" /> 
Figure 3: Picture of imaging/surgical platform design and orientation under the objective inverter. (A)&#160;The panel on the left demonstrates a representative image of the positioning of an anesthetized mouse (anesthesia nose cone was removed briefly for taking the picture). Note the use of a custom steel ring to attach the mouse skull to decrease the contribution of breathing artifacts throughout the imaging procedures. The image on the right demonstrates an image of the cortical window under a dissecting microscope. (B)&#160;Sketch of the thin skull preparation from a coronal view demonstrating the layers of the skull in relation to the dura mater and the thickness of the thinned area in relation to the full skull thickness.
<img alt="Figure 4" src="/files/ftp_upload/52794/52794fig4.jpg" /> 
Figure 4: Picture of Rose Bengal Clot formation. Representative images of a single vessel containing Rose Bengal dye that was injected through the tail vein of the mouse. The images demonstrate the progression of clot formation within the vessel following irradiation of the area at 0, 1, 1.5 and 2 min. Note the accumulation of the Rose Bengal dye (white) preceding the clot (black) in the 2 min&#160;frame demonstrating the complete occlusion of the artery.
<img alt="Figure 5" src="/files/ftp_upload/52794/52794fig5.jpg" /> 
Figure 5: 2,3,5-triphenyltetrazolium chloride (TTC) image of RB induced lesion.&#160;Representative images are shown on Day 1 and 5 post-photothrombosis induction. The mice were sacrificed and the brains rapidly removed and sliced into 1mm coronal sections and stained with TTC according to standard methods. TTC is a commonly used stain for the detection of cerebral infarction by the formation of red formazan TTC products in healthy tissue. The lack of formazan production (white tissue) indicates the infarct area. The areas indicated by the boxes demonstrate the typical lesion sizes obtained following a clot produced within a vessel approximately 80 &#181;m in diameter.
<img alt="Figure 6" src="/files/ftp_upload/52794/52794fig6.jpg" /> 
Figure 6: Schematic representation of the Rose Bengal photothrombotic procedure.

Watch this Scientific Journal Video about Rose Bengal Photothrombosis by Confocal Optical Imaging In Vivo:  A Model of Single Vessel Stroke at JoVE.com

Rose Bengal Photothrombosis by Confocal Optical Imaging In Vivo:  A Model of Single Vessel Stroke

Here, we describe a semi-invasive optical microscopy approach for the induction of a Rose Bengal photothrombotic clot in the somatosensory cortex of a mouse in vivo. The technical aspects of the imaging procedure are described from induction of a photothrombotic event to application and data collection.

Rose Bengal Photothrombosis by Confocal Optical Imaging In Vivo: A Model of Single Vessel Stroke

In vivo imaging techniques have increased in utilization due to recent advances in imaging dyes and optical technologies, allowing for the ability to ...

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15.0K Views.  The University of Texas Health Science Center San Antonio. Here, we describe a semi-invasive optical microscopy approach for the induction of a Rose Bengal photothrombotic clot in the somatosensory cortex of a mouse in vivo. The technical aspects of the imaging procedure are described from induction of a photothrombotic event to application and data collection. 

Video: Rose Bengal Photothrombosis by Confocal Optical Imaging In Vivo:  A Model of Single Vessel Stroke

Photothrombotic Ischemia: A Minimally Invasive and Reproducible Photochemical Cortical Lesion Model for Mouse Stroke Studies

The photothrombotic stroke model aims to induce an ischemic damage within a given cortical area by means of photo-activation of a previously injected light-sensitive dye. Following illumination, the dye is activated and produces singlet oxygen that damages components of endothelial cell membranes, with subsequent platelet aggregation and thrombi formation, which eventually determines the interruption of local blood flow. This approach, initially proposed by Rosenblum and El-Sabban in 1977, was later improved by Watson in 1985 in rat brain and set the basis of the current model. Also, the increased availability of transgenic mouse lines further contributed to raise the interest on the photothrombosis model. Briefly, a photosensitive dye (Rose Bengal) is injected intraperitoneally and enters the blood stream. When illuminated by a cold light source, the dye becomes activated and induces endothelial damage with platelet activation and thrombosis, resulting in local blood flow interruption. The light source can be applied on the intact skull with no need of craniotomy, which allows targeting of any cortical area of interest in a reproducible and non-invasive way. The mouse is then sutured and allowed to wake up. The evaluation of ischemic damage can be quickly accomplished by triphenyl-tetrazolium chloride or cresyl violet staining. This technique produces infarction of small size and well-delimited boundaries, which is highly advantageous for precise cell characterization or functional studies. Furthermore, it is particularly suitable for studying cellular and molecular responses underlying brain plasticity in transgenic mice.

Photothrombosis is a quick, minimally-invasive technique for inducing small and well-delimited infarction in areas of interest in highly reproducible manner. It is particularly suitable for studying cellular and molecular responses underlying brain plasticity in transgenic mice.

The photothrombotic stroke model aims to induce an ischemic damage within a given cortical area by means of photo-activation of a previously injected ...

Combined Near-infrared Fluorescent Imaging and Micro-computed Tomography for Directly Visualizing Cerebral Thromboemboli

Direct thrombus imaging visualizes the root cause of thromboembolic infarction. Being able to image thrombus directly allows far better investigation of stroke than relying on indirect measurements, and will be a potent and robust vascular research tool. We use an optical imaging approach that labels thrombi with a molecular imaging thrombus marker&#160;&#8212; a Cy5.5 near-infrared fluorescent (NIRF) probe that is covalently linked to the fibrin strands of the thrombus by the fibrin-crosslinking enzymatic action of activated coagulation factor XIIIa during the process of clot maturation. A micro-computed tomography (microCT)-based approach uses thrombus-seeking gold nanoparticles (AuNPs) functionalized to target the major component of the clot: fibrin. This paper describes a detailed protocol for the combined in vivo microCT and ex vivo NIRF imaging of thromboemboli in a mouse model of embolic stroke. We show that in vivo microCT and fibrin-targeted glycol-chitosan AuNPs (fib-GC-AuNPs) can be used for visualizing both in situ thrombi and cerebral embolic thrombi. We also describe the use of in vivo microCT-based direct thrombus imaging to serially monitor the therapeutic effects of tissue plasminogen activator-mediated thrombolysis. After the last imaging session, we demonstrate by ex vivo NIRF imaging the extent and the distribution of residual thromboemboli in the brain. Finally, we describe quantitative image analyses of microCT and NIRF imaging data. The combined technique of direct thrombus imaging allows two independent methods of thrombus visualization to be compared: the area of thrombus-related fluorescent signal on ex vivo NIRF imaging vs. the volume of hyperdense microCT thrombi in vivo.

This protocol describes the application of combined near-infrared fluorescent (NIRF) imaging and micro-computed tomography (microCT) for visualizing cerebral thromboemboli. This technique allows the quantification of thrombus burden and evolution. The NIRF imaging technique visualizes fluorescently labeled thrombus in excised brain, while the microCT technique visualizes thrombus inside living animals using gold-nanoparticles.

Direct thrombus imaging visualizes the root cause of thromboembolic infarction. Being able to image thrombus directly allows far better investigation of ...

Quantification of Cerebral Perfusion using Laser Speckle Imaging and Infarct Volume using MRI in a Pre-clinical Model of Posterior Circulation Stroke

Background: Basilar artery occlusion (BAO) is a subset of posterior circulation stroke that carries a mortality as high as 90%.&#160; The current clinical standard to diagnose ischemic stroke include computerized tomography (CT), CT angiography and perfusion and magnetic resonance imaging (MRI). Large animal pre-clinical models to accurately reflect the clinical disease as well as methods to assess stroke burden and evaluate treatments are lacking.
Methods: We describe a canine model of large vessel occlusion (LVO) stroke in the posterior circulation, and developed a laser speckle imaging (LSI) protocol to monitor perfusion changes in real time.&#160; We then utilized high b-value DWI (b=1800s/mm2) MRI to increase detection sensitivity. We also evaluated the ability of magnetic resonance angiography (MRA) to assess arterial occlusion and correlate with DSA. Finally, we verified infarct size from apparent diffusion coefficient (ADC) mapping with histology.&#160;
Results:&#160; Administration of thromboembolism occluded the basilar artery as tracked by DSA (n=7).&#160; &#160;LSI correlated with DSA, demonstrating a reduction in perfusion after stroke onset that persisted throughout the experiment, allowing us to monitor perfusion in real time.&#160; DWI with an optimized b-value for dogs illustrated the stroke volume and allowed us to derive ADC and magnetic resonance angiography (MRA) images. The MRA performed at the end of the experiment correlated with DSA performed after occlusion. Finally, stroke burden on MRI correlated with histology.
Conclusions: Our studies demonstrate real time perfusion imaging using LSI of a canine thromboembolic LVO model of posterior circulation stroke, which utilizes multimodal imaging important in the diagnosis and treatment of ischemic stroke.

A canine model of LVO stroke was utilized to develop laser speckle imaging to monitor cerebral perfusion in real-time.&#160; Diffusion-weighted MRI was optimized to image infarct volume utilizing a high b-value, enabling ADC and MRA, correlated with DSA at the time of stroke.&#160; Finally, ADC reconstructions correlated with histological findings.

Background: Basilar artery occlusion (BAO) is a subset of posterior circulation stroke that carries a mortality as high as 90%.&#160; The current clinical ...

Neuroscience

A Fibrin-Enriched and tPA-Sensitive Photothrombotic Stroke Model

An ideal thromboembolic stroke model requires certain properties, including relatively simple surgical procedures with low mortality, a consistent infarction size and location, precipitation of platelet:fibrin intermixed blood clots similar to those in patients, and an adequate sensitivity to fibrinolytic treatment. The rose bengal (RB) dye-based photothrombotic stroke model meets the first two requirements but is highly refractory to tPA-mediated lytic treatment, presumably due to its platelet-rich, but fibrin-poor clot composition. We reason that combination of RB dye (50 mg/kg) and a sub-thrombotic dose of thrombin (80 U/kg) for photoactivation aimed at the proximal branch of middle cerebral artery (MCA) may produce fibrin-enriched and tPA-sensitive clots. Indeed, the thrombin and RB (T+RB)-combined photothrombosis model triggered mixed platelet:fibrin blood clots, as shown by immunostaining and immunoblots, and maintained consistent infarct sizes and locations plus low mortality. Moreover, intravenous injection of tPA (Alteplase, 10 mg/kg) within 2 h post-photoactivation significantly decreased the infarct size in T+RB photothrombosis. Thus, the thrombin-enhanced photothrombotic stroke model may be a useful experimental model to test novel thrombolytic therapies.

Traditional photothrombotic stroke (PTS) models mainly induce dense platelet aggregates of a high resistance to tissue plasminogen activator (tPA)-lytic treatment. Here a modified murine PTS model is introduced by co-injecting thrombin and photosensitive dye for photoactivation. The thrombin-enhanced PTS model produces mixed platelet:fibrin clots and is highly sensitive to tPA-thrombolysis.

An ideal thromboembolic stroke model requires certain properties, including relatively simple surgical procedures with low mortality, a consistent ...

Modeling Stroke in Mice: Focal Cortical Lesions by Photothrombosis

Stroke is a leading cause of death and acquired adult disability in developed countries. Despite extensive investigation for novel therapeutic strategies, there remain limited therapeutic options for stroke patients. Therefore, more research is needed for pathophysiological pathways such as post-stroke inflammation, angiogenesis, neuronal plasticity, and regeneration. Given the inability of in vitro models to reproduce the complexity of the brain, experimental stroke models are essential for the analysis and subsequent evaluation of novel drug targets for these mechanisms. In addition, detailed standardized models for all procedures are urgently needed to overcome the so-called replication crisis. As an effort within the ImmunoStroke research consortium, a standardized photothrombotic mouse model using an intraperitoneal injection of Rose Bengal and the illumination of the intact skull with a 561 nm laser is described. This model allows the performance of stroke in mice with allocation to any cortical region of the brain without invasive surgery; thus, enabling the study of stroke in various areas of the brain. In this video, the surgical methods of stroke induction in the photothrombotic model along with&#160;histological analysis are demonstrated.

Described here is the photothrombotic stroke model, where a stroke is produced through the intact skull by inducing permanent microvascular occlusion using laser illumination after administration of a photosensitive dye.

Stroke is a leading cause of death and acquired adult disability in developed countries. Despite extensive investigation for novel therapeutic strategies, ...

Optimization of the Retinal Vein Occlusion Mouse Model to Limit Variability

Mouse models of retinal vein occlusion (RVO) are often used in ophthalmology to study hypoxic-ischemic injury in the neural retina. In this report, a detailed method pointing out critical steps is provided with recommendations for optimization to achieve consistently successful occlusion rates across different genetically modified mouse strains. The RVO mouse model consists primarily of the intravenous administration of a photosensitizer dye followed by laser photocoagulation using a retinal imaging microscope attached to an ophthalmic guided laser. Three variables were identified as determinants of occlusion consistency. By adjusting the wait time after rose bengal administration and balancing the baseline and experimental laser output, the variability across experiments can be limited and a higher success rate of occlusions achieved. This method can be used to study retinal diseases that are characterized by retinal edema and hypoxic-ischemic injury. Additionally, as this model induces vascular injury, it can also be applied to study the neurovasculature, neuronal death, and inflammation.

Here, we describe an optimized protocol for retinal vein occlusion using rose bengal and a laser-guided retinal imaging microscope system with recommendations to maximize its reproducibility in genetically modified strains.

Mouse models of retinal vein occlusion (RVO) are often used in ophthalmology to study hypoxic-ischemic injury in the neural retina. In this report, a ...

Non-Invasive Integrated PAUSAT Whole-Brain Imaging of Ischemic Stroke

Integrated Photoacoustic, Ultrasound, and Angiographic Tomography (PAUSAT) for NonInvasive Whole-Brain Imaging of Ischemic Stroke

Presented here is an experimental ischemic stroke study using our newly developed noninvasive imaging system that integrates three acoustic-based imaging technologies: photoacoustic, ultrasound, and angiographic tomography (PAUSAT). Combining these three modalities helps acquire multi-spectral photoacoustic tomography (PAT) of the brain blood oxygenation, high-frequency ultrasound imaging of the brain tissue, and acoustic angiography of the cerebral blood perfusion. The multi-modal imaging platform allows the study of cerebral perfusion and oxygenation changes in the whole mouse brain after stroke. Two commonly used ischemic stroke models were evaluated: the permanent middle cerebral artery occlusion (pMCAO) model and the photothrombotic (PT) model. PAUSAT was used to image the same mouse brains before and after a stroke and quantitatively analyze both stroke models. This imaging system was able to clearly show the brain vascular changes after ischemic stroke, including significantly reduced blood perfusion and oxygenation in the stroke infarct region (ipsilateral) compared to the uninjured tissue (contralateral). The results were confirmed by both laser speckle contrast imaging and triphenyltetrazolium chloride (TTC) staining. Furthermore, stroke infarct volume in both stroke models was measured and validated by TTC staining as the ground truth. Through this study, we have demonstrated that PAUSAT can be a powerful tool in noninvasive and longitudinal preclinical studies of ischemic stroke.

Author Spotlight: Integrated Photoacoustic, Ultrasound, and Angiographic Tomography (PAUSAT) for NonInvasive Whole-Brain Imaging of Ischemic Stroke  

This work demonstrates the use of a multimodal ultrasound-based imaging platform for noninvasive imaging of ischemic stroke. This system allows for the quantification of blood oxygenation through photoacoustic imaging and impaired perfusion in the brain through acoustic angiography.

Presented here is an experimental ischemic stroke study using our newly developed noninvasive imaging system that integrates three acoustic-based imaging ...

Real-Time Monitoring and Modulation of Blood Pressure in a Rabbit Model of Ischemic Stroke

Control of blood pressure, in terms of both absolute values and its variability, affects outcomes in ischemic stroke patients. However, it remains challenging to identify the mechanisms that lead to poor outcomes or evaluate measures by which these effects can be mitigated because of the prohibitive limitations inherent to human data. In such cases, animal models can be utilized to conduct rigorous and reproducible evaluations of diseases. Here we report refinement of a previously described model of ischemic stroke in rabbits that is augmented with continuous blood pressure recording to assess the impacts of modulation on blood pressure. Under general anesthesia, femoral arteries are exposed through surgical cutdowns to place arterial sheaths bilaterally. Under fluoroscopic visualization and roadmap guidance, a microcatheter is advanced into an artery of the posterior circulation of the brain. An angiogram is performed by injecting the contralateral vertebral artery to confirm occlusion of the target artery. With the occlusive catheter remaining in position for a fixed duration, blood pressure is continuously recorded to allow for tight titration of blood pressure manipulations, whether through mechanical or pharmacological means. At the completion of the occlusion interval, the microcatheter is removed, and the animal is maintained under general anesthesia for a prescribed length of reperfusion. For acute studies, the animal is then euthanized and decapitated. The brain is harvested and processed to measure the infarct volume under light microscopy and further assessed with various histopathological stains or spatial transcriptomic analysis. This protocol provides a reproducible model that can be utilized for more thorough preclinical studies on the effects of blood pressure parameters during ischemic stroke. It also facilitates effective preclinical evaluation of novel neuroprotective interventions that might improve care for ischemic stroke patients.

Continuous arterial blood pressure recording allows the investigation of impacts of various hemodynamic parameters. This report demonstrates the application of continuous arterial blood pressure monitoring in a large animal model of ischemic stroke for determination of stroke pathophysiology, impact of different hemodynamic factors, and the assessment of novel treatment approaches.

Control of blood pressure, in terms of both absolute values and its variability, affects outcomes in ischemic stroke patients. However, it remains ...

Modeling Photothrombotic Stroke in Mouse Model: A Laser Illumination Technique Through Mouse Skull Following Photosensitive Dye Administration to Induce Photothrombosis

Source: Llovera, G. et al. <a href="https://www-jove-com.remotexs.ntu.edu.sg/v/62536">Modeling Stroke in Mice: Focal Cortical Lesions by Photothrombosis.</a> J. Vis. Exp. (2021)
This video demonstrates the procedure to generate photothrombotic stroke in a mouse model by laser illumination of an intact skull following administration of photosensitive dye.

Source: Llovera, G. et al. Modeling Stroke in Mice: Focal Cortical Lesions by Photothrombosis. J. Vis. Exp. (2021)
This video demonstrates the procedure ...

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Rodent Models

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 Inducing Blood Clot Formation in the Mouse Brain Using a Photosensitive Dye

<a href='https://app-jove-com.remotexs.ntu.edu.sg/v/52794/rose-bengal-photothrombosis-confocal-optical-imaging-vivo-model'>Source: Talley Watts, L., et al. Rose Bengal Photothrombosis by Confocal Optical Imaging In Vivo: A Model of Single Vessel Stroke. J. Vis. Exp.&#160;(2015)</a>This video demonstrates a technique to induce blood clot formation in a mouse brain. An anesthetized mouse with a cranial window and a thinned skull undergoes photothrombosis through the activation of a photosensitive dye using high-intensity light. This process generates reactive oxygen species, which damage the vessel walls and trigger clot formation, ultimately obstructing blood flow to the brain.

Rose Bengal Photothrombosis by Confocal Optical Imaging In Vivo: A Model of Single Vessel Stroke

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